Synaptic Circuitry in Sensory Pathways
A Research Lab in Department of Psychology, University of Virginia
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1 to 10 of 13 Results
Sequence Homology and Transcription Factor Binding Site Analysis
Aug 6, 2025
Kipcak, Arda; Erisir, Alev, 2025, "Sequence Homology and Transcription Factor Binding Site Analysis", https://doi.org/10.18130/V3/NEGJWP, University of Virginia Dataverse, V1, UNF:6:K4mR/ss/HbBF1xiUtIw8iA== [fileUNF]
This dataset contains: 1) The annotated human, tree shrew and mouse CBLN2 promoter files (FASTA) 2) TFBS motifs on human CBLN2 promoter (CSV) 3) The code used to perform pairwise sequence analysis and TFBS Enrichment (R)
huCBLN2Pro.fa
Aug 6, 2025 - Sequence Homology and Transcription Factor Binding Site Analysis
Unknown - 1.8 KB - MD5: eeb1324469c782fa4b9443b92d3d3b95
huPromoter Panel.tab
Aug 6, 2025 - Sequence Homology and Transcription Factor Binding Site Analysis
Tabular Data - 133.8 KB - 10 Variables, 1649 Observations - UNF:6:K4mR/ss/HbBF1xiUtIw8iA==
msCBLN2Pro.fa
Aug 6, 2025 - Sequence Homology and Transcription Factor Binding Site Analysis
Unknown - 1.2 KB - MD5: b0c43f755d8c12d6fc6ec5c1f1adb8b1
SCRIPT_R_TFBS_Analysis_KipcakAndErisir.R
Aug 6, 2025 - Sequence Homology and Transcription Factor Binding Site Analysis
R Syntax - 8.4 KB - MD5: 76e0b2d0b2473a90c921cac0dddc2c16
tsCBLN2Pro.fa
Aug 6, 2025 - Sequence Homology and Transcription Factor Binding Site Analysis
Unknown - 1.8 KB - MD5: db9e1caabb9a9b01441d38fa4354da0e
Prairie Vole Brain Atlas
Apr 12, 2024
Ramos, Erin; Erisir, Alev, 2024, "Prairie Vole Brain Atlas", https://doi.org/10.18130/V3/LSAONY, University of Virginia Dataverse, V1
An annotated histochemical brain atlas of Prairie Vole (microtus ochrogaster) is constructed by Erin Ramos as part of her PhD dissertation.
Prairie Vole Atlas_Ramos et al.pdf
Apr 12, 2024 - Prairie Vole Brain Atlas
Adobe PDF - 33.9 MB - MD5: 12c08824b81e0b75f5fdddfd0c8ff46e
This brain atlas contains 33 sets of coronal sections stained for Myelin, Nissl or Oxytocin. Brain structures are outlined and annotated. The pdf is editable by researchers who wish to implement the outlines and annotations on their own prairie vole brain samples. Any questions can be directed to Erin Ramos (enk2us@virginia.edu) or Alev Erisir (eri...
R script files that are referred to in Unbiased Sampling and Volume-Sorting of Origin-Specific Terminals Using SBEM Image Stacks by Erisir, Briegel, Maher, and Sciaccotta, 202
Aug 8, 2023
Erisir, Alev, 2023, "R script files that are referred to in Unbiased Sampling and Volume-Sorting of Origin-Specific Terminals Using SBEM Image Stacks by Erisir, Briegel, Maher, and Sciaccotta, 202", https://doi.org/10.18130/V3/9VXAZ7, University of Virginia Dataverse, V1
This dataset contains R Script files used in the Volumetric Sorting method described in Erisir et al., 202x [citation in progress]. A sample data file and a README file are also included. MClust_Volume_Sorting.R organizes a data file that is similar in structure to the sample file and runs mclust analysis to identify terminal subpopulations, the vo...
MClust_Volume_Sorting.R
Aug 8, 2023 - R script files that are referred to in Unbiased Sampling and Volume-Sorting of Origin-Specific Terminals Using SBEM Image Stacks by Erisir, Briegel, Maher, and Sciaccotta, 202
R Syntax - 1.5 KB - MD5: 6a28037b8fdd58f5c407a7c796826ed6
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